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  5. 5drib_c:0
5drib_c:0 in iPC815
  • 5-deoxy-D-ribose
  • Charge: 0
  • Formula: C5H10O4
  • Compartment: c - cytosol
  • Universal Metabolite: 5drib
CHEBI:62012
  • 5-deoxy-D-ribose
  • Type: Small Molecule
  • InChiKey: WDRISBUVHBMJEF-MROZADKFSA-N
  • View on ChEBI
Properties
  • Molecular Mass||g/mol: 134.1305[0], 134.0[1,2]
  • SMILES: C[C@@H](O)[C@@H](O)[C@@H](O)C=O[0,1]
  • Names: 5'-deoxyribose[0,1], 5-deoxy-D-ribose[0,1], (2R,3R,4R)-2,3,4-trihydroxypentanal[0], 5-deoxy-aldehydo-D-ribose[0], D-ribo-2,3,4-trihydroxyvaleraldehyde[0], 5-desoxy-D-ribose[0], (2R,3R,4R)-2,3,4-trihydroxyvaleraldehyde[0], 5-Deoxy-D-ribose[1,2], [2]
Data Sources: [0] CHEBI:62012 via ChEBI, [1] cpd15380 via ModelSEED, [2] cpd17002 via ModelSEED
Linkouts
Data Sources: [0] CHEBI:62012 via ChEBI, [1] cpd15380 via ModelSEED, [2] cpd17002 via ModelSEED
MEMOTE Flags
This metabolite was flagged in the following MEMOTE tests:

A total of 110 (7.09%) metabolites are not consumed by any reaction of the model: __iPC815__feoxam_p, __iPC815__apg161_c, __iPC815__valtrna_c, 4h2opntn_c, __iPC815__ascb6p_c, ...

Dead-ends are metabolites that can only be produced but not consumed by reactions in the model. They may indicate the presence of network and knowledge gaps. Implementation: Find dead-end metabolites structurally by considering only reaction equations and bounds. FBA is not carried out.

Reactions involving 5drib_c in iPC815
  BiGG ID Name Reference Transport Collection-specific Model
  BiGG ID Name Reference Transport Collection-specific Model