Search for any model, metabolite or reaction by BiGG ID or name.

To search for entries linked to external identifiers, use the format [namespace]:[identifier]. Possible namespaces are: (auto indicates the the enitity type is automatically derived from the identifier.)

  • CHEBI
    • Ex: CHEBI:17790
  • RHEA
    • Ex: RHEA:16505
  • InChIKey
    • The rightmost two parts of the InChIKey can optionally be omitted to search for compounds with different protonation states and different stereochemistries.
    • Ex: InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA-J, InChiKey:ZKHQWZAMYRWXGA-KQYNXXCUSA, InChiKey:ZKHQWZAMYRWXGA-
  • EC / ec-code
    • Partial EC-codes can be provided, optionally with an asterix at the end.
    • Ex: ec-code:4.1.3.27, EC:4.1.3.*,
  • seed (auto), seed.compound, seed.reaction
    • Identifiers can also be entered directly.
    • Ex: cpd00023, seed:cpd00023, seed.reaction:rxn00126
  • kegg (auto), kegg.compound, kegg.reaction
    • Ex: kegg.compound:C00062, kegg:R01086
  • metacyc (auto), metacyc.compound, metacyc.reaction
    • Ex: metacyc:VAL, metacyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN
  • metanetx (auto), metanetx.chemical, metanetx.reaction
    • Identifiers can also be entered directly.
    • Ex: metanetx:MNXR100289, MNXR100289

BiGGr
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Gene
SA0220

SA0220

  • Model: iSB619
Associated reactions
  BiGG ID Name Gene reaction rule
GPDDA1 Glycerophosphodiester phosphodiesterase (Glycerophosphocholine) SA0036 or SA0820 or SA1542 or SA0969 or SA0220
GPDDA2 Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine) SA0036 or SA0820 or SA1542 or SA0969 or SA0220
GPDDA3 Glycerophosphodiester phosphodiesterase (Glycerophosphoserine) SA0036 or SA0820 or SA1542 or SA0969 or SA0220
GPDDA4 Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol) SA0036 or SA0820 or SA1542 or SA0969 or SA0220
GPDDA5 Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol) SA0036 or SA0820 or SA1542 or SA0969 or SA0220